Electronic Journal of Polish Agricultural Universities (EJPAU) founded by all Polish Agriculture Universities presents original papers and review articles relevant to all aspects of agricultural sciences. It is target for persons working both in science and industry,regulatory agencies or teaching in agricultural sector. Covered by IFIS Publishing (Food Science and Technology Abstracts), ELSEVIER Science - Food Science and Technology Program, CAS USA (Chemical Abstracts), CABI Publishing UK and ALPSP (Association of Learned and Professional Society Publisher - full membership). Presented in the Master List of Thomson ISI.
2001
Volume 4
Issue 2
Topic:
Animal Husbandry
ELECTRONIC
JOURNAL OF
POLISH
AGRICULTURAL
UNIVERSITIES
Brodacki A. , Ziêba G. , Cywa–Benko K. 2001. GENETIC DISTANCE BETWEEN SELECTED BREEDS AND LINES OF LAYING HENS, EJPAU 4(2), #04.
Available Online: http://www.ejpau.media.pl/volume4/issue2/animal/art-04.html

GENETIC DISTANCE BETWEEN SELECTED BREEDS AND LINES OF LAYING HENS

Antoni Brodacki, Grzegorz Ziêba, Katarzyna Cywa–Benko

 

ABSTRACT

The investigations were aimed at the determination of genetic distance among eight lines of laying hens kept in Poland and belonging to the following breeds: Green–Leg ZKF and Z11, Leghorn H22 and G99, Rhode Island Red RD2, Yellow–Leg ¯33, Polbar (Pb) and Sussex (Sx). The phenotype frequencies of fast–migrating prealbumin (Pa–F), egg–yolk transferrin and ovalbumin (Ov–A), ovoglobulins: G3, G4 and G2 and conalbumin were obtained from the electrophoregrams of horizontal polyacrylamide gel electrophoresis.

Key words: hens, protein polymorphism, genetic distance.

INTRODUCTION

Among its other applications, protein polymorphism can be used in phylogenetic studies or to create genetic characteristics of herds and breeds of animals. According to Okabayashi et al. [12], genetic differences among animal groups may be determined basing on genetic distances. The genetic distance allows determination of similarities between the stocks of animals with a single estimated number. Genetic distances in hens, based on blood serum and egg content protein or enzyme polymorphism, were presented by, among others, Hashiguchi et al. [5], Cewa–Benko et al. [2] and Moiseeva et al. [10].

The most recent achievements in molecular biology allow determination of DNA polymorphism–based distances with the random amplification of polymorphic DNA (RAPD), with DNA fingerprinting [11, 14, 16, 18] or basing on microsatellite DNA polymorphism [1, 6].

The aim of the study was to determine egg–content protein genetic polymorphism and to estimate the genetic distance among the breeds and lines of hens belonging to gene pool stocks that are managed in Poland. The studies may contribute to more efficient preservation of biodiversity in this domestic species of birds.

MATERIALS AND METHODS

Egg–content proteins were separated with horizontal polyacrylamide gel electrophoresis, according to the method by Gahne et al. [3], with own modifications by G³uchowski et al. [4]. The number of 90–120 eggs had been collected form the laying hens of the following breeds: Green–Leg ZKF and Polbar (Pb) – from the experimental station in Felin, Poland – and Green–Leg Z11, Yellow–Leg Z33, Leghorn (H22 and G99), Rhode Island Red RD2 and Sussex S66 – from gene pool stocks in Zyczyn, Poland.

Prior to electrophoresis, the egg white was tenfold diluted, and the yolk was fourfold diluted, both with distilled water. After the electrophoresis, the gel plates were dehydrated in ethyl alcohol, and next laminated at 125°C in order to increase their durability, which facilitated collecting and storing of the research documentation.

Egg–yolk proteins were separated into approx. 30 bands (Fig. 1), which were classified as belonging to the following regions, according to migration speed: prealbumin (Pa), albumin (Alb) and transferrin (Tf). In the white of egg, the following proteins were identified: ovalbumins (Ov–A), ovoglobulins: G2, G3, and G4 and conalbumins (Co).

Figure 1. Electrophoregram of hen egg yolk and white proteins
A - serum, B - Yolk, C - White

The frequencies of genotypes and genes that determine egg protein phenotypes were derived for the hens in individual stocks, and genetic equilibrium of the stocks was verified. Basing on the established gene frequencies, average heterozygosity per single locus, genetic similarities and genetic distances among the stocks were estimated, and a dendrogram of genetic distances for the studied stocks was plotted.

RESULTS

Figure 1 presents a diagram of electrophoregrams for egg yolk and egg white proteins with the subregions highlighted that are characterized by genetic polymorphism. An exemplary electrophoregram of hen serum proteins is presented as well.

In the subregion of fast–migrating yolk prealbumin, Pa–F, ten different phenotypes were observed, which reflect the genotypes whose frequencies are presented in Table 1. In the Z11, ZFK and Pb hens, three phenotypes appeared in each, i.e. B, BD and D, whereas in ¯33, H22 and G99 hens, five or six different phenotypes of the protein were observed. The most polymorphic were S66 hens, for which ten phenotypes were recorded, while the lowest level of polymorphism was observed among RD2 hens, with two phenotypes. In all the studied lines, the phenotype B appeared in the transferrin region, while only a few individuals had the triple–band BC phenotype.

Table 1. Genotype frequencies of egg yolk proteins Pa–F and Tf in gene pool hen stocks

Stocks

n

Pa–F

Tf

A

AB

B

AD

BD

D

AC

BC

CD

C

B

BC

Green–Leg
Z–11 (Szczytno)

90

0.00

0.00

24.40

0.00

42.20

33.3

0.00

0.00

0.00

0.00

92.2

7.8

Green–Leg
(Felin)

98

0.00

0.00

34.70

0.00

51.00

14.3

0.00

0.00

0.00

0.00

94.9

5.1

Yellow–Leg
¯–33

100

0.00

0.00

22.00

0.00

43.00

33.0

0.00

1.00

1.00

0.00

90.0

10.0

Polbar
(Felin)

120

0.00

0.00

28.30

0.00

49.10

22.5

0.00

0.00

0.00

0.00

98.3

1.7

Leghorn
H–22

90

7.80

3.30

4.40

24.40

26.70

33.3

0.00

0.00

0.00

0.00

95.6

4.4

Leghorn
G–99

100

4.00

13.00

0.00

26.00

22.00

35.0

0.00

0.00

0.00

0.00

98.0

2.0

Rhode Island Red
RD–2

90

0.00

0.00

0.00

0.00

0.00

97.8

0.00

0.00

2.20

0.00

96.7

3.3

Sussex
S–66

120

9.57

9.57

6.96

26.10

6.96

10.4

11.30

0.90

12.20

5.22

100.0

0.0

The frequencies of the genes that encode the proteins Pa–F and Tf are presented in Table 2. In the stocks of Z11, ZKF, Pb and ¯33, alleles Pa–FB and Pa–FD occurred, whose frequencies were similar. In Leghorn hens, an additional allele Pa–FA occurred, and in S66, RD2 and ¯33 hens – an allele Pa–FC.

Phenotype frequencies of ovalbumins (Ov–A), ovoglobulins G3, G4 and G2, as well as of conalbumins (Co) are presented in Table 3. The Ov–A proteins of ¯33, RD2 and S66 hens were monomorphic, Z11 and G99 hens were observed to have three phenotypes each, whereas the remaining breeds had phenotypes B and AB. Similar polymorphism and phenotype frequencies were observed for ovoglobulins G3. Ovoglobulins G4 were represented by all three phenotypes, i.e. A, AB and B, in all the groups, except for RD2 hens, similarly to ovoglobulins G2, where also generally three phenotypes, i.e. B, BC and C, were observed, except for the lines ZKF and S66. Conalbumins were polymorphic only in two stocks, Z11 and ¯33, while in the others they were monomorphic.

Table 2. Allele frequencies of egg yolk proteins Pa–F and Tf in gene pool hen stocks

Stocks

Pa–F

Tf

A

B

C

D

B

C

Green–Leg Z–11 (Szczytno)

0.00

0.455

0.00

0.545

0.961

0.039

Green–Leg (Felin)

0.00

0.602

0.00

0.398

0.975

0.025

Yellow–Leg ¯–33

0.00

0.440

0.01

0.550

0.950

0.050

Polbar (Felin)

0.00

0.529

0.00

0.472

0.991

0.009

Leghorn H–22

0.217

0.194

0.00

0.589

0.978

0.022

Leghorn G–99

0.235

0.175

0.00

0.590

0.990

0.010

Rhode Island Red RD–2

0.00

0.00

0.011

0.989

0.983

0.017

Sussex S–66

0.328

0.152

0.182

0.338

1.000

0.000

Table 3. Frequencies of ovalbumin, ovoglobulins G4, G3 and G2 and conalbumin genotypes in the gene pool hen stocks

Stocks

Ov–A

G4

G3

G2

Co

A

AB

B

A

AB

B

A

AB

B

B

BC

C

B

BC

Green–Leg
Z–11 (Szczytno)

1.1

18.9

80.0

33.3

53.3

13.3

1.1

18.9

80.0

2.2

47.8

50.0

98.9

1.1

Green–Leg (Felin)

0.0

12.2

87.8

53.1

41.8

5.0

0.0

12.2

87.8

0

28.6

71.4

100.0

0.0

Yellow–Leg
¯–33

0.0

0

100.0

66.0

31.0

3.0

0.0

0.0

100.0

1.0

43.0

56.0

98.0

2.0

Polbar (Felin)

0.0

1.7

98.3

56.8

35.6

7.8

0.0

1.7

98.3

21.7

61.6

16.7

100.0

0.0

Leghorn H–22

0.0

16.7

83.3

24.4

62.2

13.3

0.0

16.7

83.3

8.9

31.3

59.8

100.0

0.0

Leghorn G–99

2.0

29.0

69.0

30.0

50.0

20.0

2.0

29.0

89.0

7.0

34.0

59.0

100.0

0.0

Rhode Island Red RD–2

0.0

0.0

100.0

83.6

16.7

0.0

0.0

0.0

100.0

5.6

43.3

37.8

100.0

0.0

Sussex S–66

0.0

0.0

100.0

35.8

50.8

13.3

0.0

0.0

100.0

0.0

40.0

60.0

100.0

0.0

The frequencies of the genes that encode egg–white ovalbumins, ovoglobulins and conalbumins are presented in Table 4. It can be noticed that the frequency of one of the alleles that encodes ovalbumins, ovoglobulins G3 and conalbumins was very high, and reached from 0.834 Ov–AB in the G99 hens to 1.00 in ¯33, RD2 and S66. The frequency of the G3B gene was similar. The alleles encoding the proteins G4 and G2 occurred with more balanced frequency among the particular groups than those encoding Ov–AB, G3 and Co. One may observe, analyzing the frequencies of egg protein encoding genes, that there are no alleles that would be specific for a particular breed. All the studied hen stocks were in the state of genetic equilibrium in respect to the frequencies of the genes that encode the egg proteins of yolk or white.

Table 4. Frequencies of ovalbumin, ovoglobulins G4, G3 and G2 and conalbumin alleles in gene pool hen stocks

STOCKS

Ov–A

G4

G3

G2

Co

A

B

A

B

A

B

B

C

B

C

Green–Leg
Z–11 (Szczytno)

0.110

0.890

0.600

0.400

0.110

0.890

0.261

0.739

0.995

0.005

Green–Leg (Felin)

0.061

0.939

0.740

0.260

0.061

0.939

0.146

0.854

1.000

0.000

Yellow–Leg
¯–33

0.000

1.000

0.818

0.182

0.000

1.000

0.225

0.775

0.990

0.010

Polbar (Felin)

0.010

0.990

0.744

0.256

0.010

0.990

0.525

0.475

1.000

0.000

Leghorn H–22

0.083

0.917

0.556

0.444

0.083

0.917

0.250

0.750

1.000

0.000

Leghorn G–99

0.165

0.835

0.550

0.450

0.165

0.835

0.240

0.760

1.000

0.000

Rhode Island Red RD–2

0.000

1.000

0.916

0.084

0.000

1.000

0.273

0.727

1.000

0.000

Sussex S–66

0.000

1.000

0.612

0.388

0.000

1.000

0.200

0.800

1.000

0.000

Genetic similarities and genetic distances among the studied breeds of hens are presented in Table 5 and in Figure 2. The averages of heterozygosity, calculated for individual groups of hens, are presented as well. The lines H22 and G22, ZKF and ¯33, as well as ZKF and Z11 were the most similar to each other. In contrast, the most distant lines from each other were the RD2 and Z11. The average heterozygosity per single locus was estimated basing on seven loci of egg content protein sets, and ranged between 0.087, for the RD2, and 0.287, for the G99 hens.

Figure 2. Dendrogram of Nei's genetic distances between the studied stocks of laying hens

Table 5. Genetic similarities (above diagonal) and Nei’s genetic distances among gene pool hen stocks in Poland
 

ZK11

ZKF

Z33

PB

H22

G99

RD2

S66

H

ZK11

0.0000

0.9914

0.9894

0.9804

0.9899

0.9868

0.9500

0.9705

0.264

ZKF

0.0086

0.0000

0.9932

0.9734

0.9706

0.9647

0.9344

0.9650

0.200

Z33

0.0106

0.0067

0.0000

0.9827

0.9772

0.9680

0.9682

0.9695

0.182

PB

0.0197

0.0268

0.0174

0.0000

0.9633

0.9528

0.9417

0.9516

0.206

H22

0.0101

0.0297

0.0229

0.0373

0.0000

0.9994

0.9602

0.9878

0.256

G99

0.0132

0.0359

0.0324

0.0482

0.0005

0.0000

0.9535

0.9810

0.287

RD2

0.0512

0.0678

0.0323

0.0600

0.0405

0.0475

0.0000

0.9379

0.087

S66

0.0299

0.0355

0.0309

0.0496

0.0122

0.0191

0.0641

0.0000

0.217

The yolk proteins, denoted as Pa–F, correspond to the fraction marked Pr–2 in Tanabe and Ogawa [17]. The number of bands observed for homozygotes was the same as in the mentioned study. However, the five or six bands observed in this subregion of heterozygotes do not correspond to those presented by Tanabe and Ogawa [17].

The phenotype frequencies recorded in this study were similar to those of the same breeds of hens studied in the years 1970–1980. The allele TfB frequency ranged between 0.80 and 1.00, whereas the allele TfC was very rare, and the allele TfA, which had been quite often present during the 1970s in the hens bred in Poland [8], in this study was not observed at all.

The frequencies of ovalbumin encoding alleles can be compared to those studied by Stratil [15], Kury³ [9] and Moiseeva et al. [10]. The frequencies calculated here correspond with those presented by these authors. It should be added, however, that the ovalbumin alleles A and B, as well as the alleles of the remaining proteins, were determined in decreasing order of migration speed to anode, which was not in line with the terminology applied by Stratil [15] and Kury³ [9].

The shortest genetic distance was noted for two lines of the Leghorn breed, i.e. H22 and G99, which certainly results from the fact of their belonging to the same breed. The numerical values of the genetic distances, presented in Table 5, ranged from 0.00058 within the Leghorn lines to 0.00861 within the stocks of Green–Legs, and are comparable to those obtained by Inafuku et al. [7] for 12 Indonesian breeds of hens, which were estimated basing on five loci of the egg proteins: Ov–A, G1, G2, G3 and Co (0.001–0.037). These values were similar to those estimated by Hashiguchi et al. [5], i.e. 0.0201–0.041 for both Asian and European hens bred in Japan. Moiseeva et al. [10] obtained considerably higher genetic distance indices. The distances were 0.212 between Sx and RiR and 0.296 between Sx and Lg. The genetic distances obtained here are much shorter than those derived from DNA polymorphism [13, 19, 20]. The presented dendrograms, which depict genetic distances, do not correspond with those presented by Wezyk et al. [19], which were estimated with RAPD–PCR for the same gene pool stocks bred in Poland. The extensive differences in the values of genetic similarity indices may have also resulted from different ways of their computation.

The lowest average heterozygosity, 0.087, was obtained for the RD2 line of hens. The remaining groups were characterized by substantially higher heterozygosity, reaching from 0.183 for Z33 hens to 0.287 for the G99 line. However, the heterozygosity was much lower than that by Hillel et al. [6], which were estimated basing on microsatellite DNA polymorphism. This characteristic ranged between 0.033 and 0.109 [5] or between 0.028 and 0.141 [7] for hens bred in Asia. Higher heterozygosity obtained in this study may have resulted from the fact that the analysis focused on genetic pool stocks, where the influence of selection on genetic polymorphism is reduced.

CONCLUSIONS

  1. In gene pool stocks of hens kept in Poland, the fast–migrating egg–yolk protein Pa–F was characterized by ten different phenotypes determined by four alleles, whereas the remaining proteins, i.e. Tf, Ov–A and ovoglobulins G4, G3, and G2, were encoded by two alleles.

  2. Nei’s genetic distances, estimated basing on seven protein loci of egg content, were the shortest for two stocks of Leghorn and for two Green–Leg stocks, and were the longest between Z11 and RD2.

  3. The average heterozygosity of the studied stocks was relatively high and ranged between 0.087 for RD2 and 0.287 for G99 hens.

REFERENCES

  1. Bjornstadt G., Gunby E., Roed K.H., 2000. Genetic structure of Norwegian horse breeds. Anim. Breed. Gen. 117: 200 – 201.

  2. Cywa–Benko K., Brodacki A., Szwaczkowski T., 1994. Comparative study of blood serum protein polymorphism in three breeds of hens. Rocz. Nauk. Zootech. 21 (1–2): 41–49 [in Polish].

  3. Gahne B., Juneja R.K., Grolmus J., 1977. Horizontal polyacrylamide gradient gel electrophoresis for simultaneous phenotyping of transferrin, post–transferrin, albumin and postalbumin in the blood plasma of cattle. Anim. Blood Groups and Biochem. Genet. 8: 127–137.

  4. Gluchowski W., Brodacki A., Rupec Z., Wojcik A., 1985. Method of polyacrylamide gel plates fixing. Folia Soc. Sci. Lubl. 27: 141–143 [in Polish].

  5. Hashiguchi T., Tsuneyoshi M., Nishida T., Higashiwutoko H., Hiraoka E., 1981. Phylogenetic relationship determined by the blood proteins types of fowls. Jap. J. Zootech. Sci. 52 (10): 713–729.

  6. Hillel J., Korol A., Kirzner V., Freidlin P., Weigend S., Barre–Dirie A., Groenen A.M., Crooijmans R.P.M. A. Tixier–Boichard M., Vignal A., Wimmers K., Burke T., Thomson P.A., Maki–Tanila A., Elo K., Zhivotovsky L.A., Feldman M.W., 1999. Biodiversity of chickens based on DNA pools: first results of the EC funded project AVIANDIV. Proc. 10th European Poultry Conf. Jerusalem: 22–29.

  7. Inafuku K., Maeda Y., Okamoto S., Ardiningsasi S. M., Hashiguchi T., 1998. Polymorphism of egg white proteins in native chickens in Indonesia. Jap. Poult. Sci. 35 (5): 278–284.

  8. Kierek–Jaszczuk D., Gasparska J., 1976. Genetic polymorphism of proteins and enzymes in blood and egg content of hens. III. Polymorphism of transferrins in blood serum and egg content of hens and in semen of roosters. Pr. Mater. Zootech. 10: 29–40 [in Polish].

  9. Kuryl J., 1978. Electrophoretic forms and the heredity of prealbumin and albumins in the blood plasma and egg content of hens. Pr. Mater. Zootech. 15: 89–104.

  10. Moiseeva I. G., Voloknovich V.A., Tolokonnikova E.V., Altukhov Yu.P., 1984, Differentiation of chicken breeds for biochemical gene markers. Gienietika 4: 671–681.

  11. Nei M., 1978. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 98: 583–590.

  12. Okabayashi H., Kamiya S., Tanabe Y., 1998. Phylogenetic relationships among Japanese native chicken breeds based on blood protein polymorphisms. Jap. Poult Sci. 35 (3): 173–181.

  13. Plotsky Y., Kaiser M.G., Lamont S.J., 1995. Genetic characterization of highly inbred chickens lines by two DNA methods: DNA fingerprinting and polymerase chain reaction using arbitrary primers. Animal Genetics 26: 163–170.

  14. Ponsuksili S., Wimmers K., Horst P., 1998. Evaluation of genetic variation within and between different chicken lines by DNA fingerprinting. J. Hered. 89: 17–23.

  15. Stratil A., 1968. Transferrin and albumin loci in chicken, Gallus gallus L. Comp. Biochem. and Physiol. 24: 113–121.

  16. Takezaki N., Nei M., 1996. Genetic distances and reconstruction of phylogenetic trees from microsatellite DNA. Genetics 144: 389–399.

  17. Tanabe H., Ogawa N, 1980. Comparative studies on physical and chemical property of avian eggs. 5. Horizontal polyacrylamide gradient gel electrophoregrams of chicken (Gallus domesticus) egg white proteins. Japan. Polt. Sci. 17: 242–248.

  18. Weigend S., 1999. Assessment of biodiversity in poultry with DNA markers. Proc. of Poultry Genetics Symposium, 6–8 October 1999, Mariensee/Germany: 7–14.

  19. Wezyk S., Cywa–Benko K., Siwek M., Bednarczyk M., Calik J., 2000. Studies on genetic diversity of gene pool breeds of hens. Rocz. Nauk. Zootech. 27 (1): 115–127 [in Polish].

  20. Zhang X., Mc. Daniel G. R., Glambrone J. J., 1995. Random Amplified Polymorphic DNA comparison among broiler lines selected for incidence of tibial dyschondroplasia. Poultry Sci. 74: 1253–1258.


Submited:
Antoni Brodacki, Grzegorz Ziêba
Department of Biological Bases of Animal Production
Agricultural University of Lublin
Akademicka 13, 20–950 Lublin, Poland

Katarzyna Cywa-Benko
National Research Institute of Animal Production
Department of Poultry Breeding and Production
32–083 Balice, Poland


Responses to this article, comments are invited and should be submitted within three months of the publication of the article. If accepted for publication, they will be published in the chapter headed ‘Discussions’ in each series and hyperlinked to the article.


[BACK] [MAIN] [HOW TO SUBMIT] [SUBSCRIPTION] [ISSUES] [SEARCH]